Article: "Building from the Brain: Advancing the Study of Threat Perception in IR"
Author: Marika Landau-Wells 
Contact: mlw@berkeley.edu

Reproduction Materials Manifest:
- CBMA_RepCode_Final.R: R code to replicate reported statistics and Figures 1B, 1C, 2A, 2B, 2C
- Brain templates and parcellations:
	- k50_2mm.nii.gz: de la Vega et al.'s 50 brain parcellations
	- k50_2mm_key.xslx: Labels for the k50 parcellations
	- k50_13_Amyg_Hipp_2mm.nii.gz: Isolation of parcel 13 (used in Figure 3) 
- CBMA Maps used for analysis:
	- Monetary_loss_P005_1000_ALE.nii
	- Physical_pain_P005_1000_ALE.nii
	- I_NEG_kda10_testStat_mean_cMass_corrp.nii
	- E_RE_thresh.nii
	- E_SH_thresh.nii
	- T_FB_thresh.nii
	- T_GA_thresh.nii
	- T_RA_thresh.nii
	- T_TR_thresh.nii
	- Adults_strict_C05_1k_ALE.nii.gz
- 3D Brain Volume Render Code (requires MRIcroGL):
	- Fig1A_Render_IO.py
	- Fig3_Render_IO.py

R Version: 4.3
- I can't guarantee this code will run with all R versions
- groundhog.library() used to preserve reproducibility of packages and dependencies

MRIcroGL (version 1.2):
- Greyscale versions of the 3D brain renderings can be replicated using the .py scripts provided 
- Installations available at https://github.com/rordenlab/MRIcroGL/releases
- Color version requires custom lut files and adjusted code.  Available upon request.

All CBMA maps are available on Neurovault.org
- Map-level links provided in CBMA_RepCode_Final.R
- Collection-level links provided in the main text
